Publications 2025

Dinesen C, VertotM, JarmuschSA, Lozano-AndradeCN, AndersenAJC, Kovács ÁT, Coupling of secondary metabolite production in Bacillus subtilis. microLIFE. 6:uqae029 https://doi.org/10.1093/femsml/uqae029

Jarmusch AK, Aron AT, Petras D, Phelan VV, Bittremieux W, Acharya DD, Ahmed MMA, Bauermeister A, Bertin MJ, Boudreau PD, Borges RM, Bowen BP, Brown CJ, Chagas FO, Clevenger KD, Correia MSP, Crandall WJ, Crüsemann M, Damiani T, Fiehn O, Garg N, Gerwick WH, Gilbert JR, Globisch D, Gomes PWP, Heuckeroth S, James CA, Jarmusch SA, Kakhkhorov SA, Kang KB, Kersten RD, Kim H, Kirk RD, Kohlbacher O, Kontou EE, Liu K, Lizama-Chamu I, Luu GT, Knaan TL, Marty MT, McAvoy AC, McCall LI, Mohamed OG, Nahor O, Niedermeyer THJ, Northen TR, Overdahl KE, Pluskal T, Rainer J, Reher R, Rodriguez E, Sachsenberg TT, Sanchez LM, Schmid R, Stevens C, Tian Z, Tripathi A, Tsugawa H, Nishida K, Matsuzawa Y, van der Hooft JJJ, Vicini A, Walter A, Weber T, Xiong Q, Xu T, Zhao HN, Dorrestein PC, Wang M 2025, A Universal Language for Finding Mass Spectrometry Data Patterns, Nature Methods https://www.biorxiv.org/content/10.1101/2022.08.06.503000v1.abstract

Jarmusch SA, Schostag MD, Yang Z, Wang J, Anderson AJC, Weber T, Ding L, Secondary metabolites shape Streptomyces-Streptomyces interaction: Mass Spectrometry Imaging reveals lydicamycins broadly induce sporulation, Applied and Environmental Microbiology https://doi.org/10.1101/2024.06.28.600750

Lozano-Andrade CN, Dinesen C, Wibowo M, Arenos Bach N, Hesselberg-Thomsen V, Jarmusch SA, Strube ML, Kovács ÁT, Surfactin facilitates establishment of Bacillus subtilis in synthetic communities. ISME Journal 19:wraf013https://doi.org/10.1093/ismejo/wraf013

Smahajcsik D, Roager L, Strube ML, Zhang S, Gram L, Stronger together: harnessing natural algal communities as potential probiotics for inhibition of aquaculture pathogens Microbiology Spectrum, Microbiology Spectrum https://doi.org/10.1101/2024.08.27.609935

Stannius RO, Kovács ÁT, Plipastatin is a shared good by Bacillus subtilis during combating Fusarium spp. FEMS Microbial Ecology, fiaf020 https://doi.org/10.1093/femsec/fiaf020

Stefanic P, Stare E, Floccari VA, Kovac J, Hertel R, Rocha U, Kovács ÁT, Mandic-Mulec I, Strube ML, Dragoš A 2025. Ecology of prophage-like elements in Bacillus subtilis at global and local geographical scale. Cell Reports 44:115197 https://doi.org/10.1016/j.celrep.2024.115197

Svendsen PB, Alfastsen L, Gram L, Henriksen NNSE, Bentzon-Tilia M, Zhang SD, Roles of Marine Microbial Natural, Annual Review in Microbiology (accepted)

Zdouc MM, Blin K, (+157 authors), Kovács ÁT, (+129 authors), Weber T, Medema MH 2025. MIBiG 4.0: Advancing biosynthetic gene cluster curation through global collaboration, Nucleic Acids Research 53:gkae1115 https://doi.org/10.1093/nar/gkae1115